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Parser for reading Agilent ('.dx') files into R

Usage

read_agilent_dx(
  path,
  path_out = NULL,
  format_out = c("matrix", "data.frame"),
  data_format = c("wide", "long"),
  read_metadata = TRUE
)

Arguments

path

Path to .dx file.

path_out

Path to directory to export unzipped files.

format_out

Matrix or data.frame.

data_format

Whether to return data in wide or long format.

read_metadata

Logical. Whether to attach metadata.

Value

A chromatogram in the format specified by format_out

(retention time x wavelength).

Author

Ethan Bass