Write chromatograms

Writes chromatograms to disk in the format specified by export_format: either (mzml), cdf or csv.

Usage

write_chroms(
  chrom_list,
  path_out,
  export_format = c("mzml", "cdf", "csv"),
  what = "",
  force = FALSE,
  show_progress = TRUE,
  verbose = getOption("verbose"),
  ...
)

Arguments

chrom_list

A list of chromatograms.

path_out

Path to directory for writing files.

export_format

Format to export files: either mzml, cdf, or csv.

what

What to write. Either MS1 or chrom.

force

Logical. Whether to overwrite existing files. Defaults to TRUE.

show_progress

Logical. Whether to show progress bar. Defaults to TRUE.

verbose

Logical. Whether to print verbose output.

...

Additional arguments to write function.

Value

No return value. The function is called for its side effects.

Side effects

Exports a chromatogram in the file format specified by export_format in the directory specified by path_out.

See also

Other write functions: write_andi_chrom(), write_mzml()

Author

Ethan Bass