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Converter for 'Agilent ChemStation' UV files

Source: R/call_aston.R
uv_converter.Rd

Defunct. Use read_chemstation_uv instead.

Usage

uv_converter(
  path,
  format_out = c("matrix", "data.frame", "data.table"),
  data_format = c("wide", "long"),
  correction = TRUE,
  read_metadata = TRUE,
  metadata_format = c("chromconverter", "raw")
)

Arguments

path

Path to file

format_out

Class of output. Either matrix, data.frame, or data.table.

data_format

Whether to return data in wide (default) or long format.

correction

Logical. Whether to apply empirical correction. Defaults is TRUE.

read_metadata

Logical. Whether to attach metadata. Defaults to TRUE.

metadata_format

Format to output metadata. Either chromconverter (standardized field names) or raw (vendor field names, unmapped).

Value

There is no return value. Calling this function is an error.

Details

This function wrapped 'Aston”s generic TraceFile reader, which imports scipy.io.netcdf.NetCDFFile. That symbol was removed in scipy v1.14, so TraceFile cannot be used without pinning scipy < 1.14 for the whole Python session. Since .uv files are read by chromConverter's internal parser, read_chemstation_uv, this wrapper was retired rather than constrain scipy for everyone.

See also

Other external parsers: call_entab(), call_openchrom(), call_rainbow(), read_thermoraw(), sp_converter()